Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DEH80_04830 | Not Available | Positive | 1049508 - 1052081 | 94049.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DEH80_04835 | Not Available | Positive | 1052223 - 1053305 | 38949.4 |
| 3-phosphoglycerate dehydrogenase | DEH80_04840 | Not Available | Positive | 1053310 - 1054488 | 41436.8 |
| prephenate dehydratase | DEH80_04845 | Not Available | Positive | 1054510 - 1055616 | 40439.9 |
| histidinol-phosphate transaminase | DEH80_04850 | Not Available | Positive | 1055654 - 1056781 | 40132.8 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DEH80_04855 | Not Available | Positive | 1056788 - 1057675 | 31329.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DEH80_04860 | Not Available | Positive | 1057672 - 1058988 | 45209.6 |
| (d)cmp kinase | DEH80_04865 | Not Available | Positive | 1058985 - 1059665 | 24440.2 |
| 30s ribosomal protein s1 | DEH80_04870 | Not Available | Positive | 1059787 - 1061466 | 62011.7 |
| integration host factor subunit beta | DEH80_04875 | Not Available | Positive | 1061591 - 1061875 | 10486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
