Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Candidatus Brocadiia
Order
Candidatus Brocadiales
Family
Candidatus Brocadiaceae
Genus
Candidatus Brocadia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Candidatus Brocadiia |
| Order | Candidatus Brocadiales |
| Family | Candidatus Brocadiaceae |
| Genus | Candidatus Brocadia |
| Species | Candidatus Brocadia sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Candidatus Brocadia sp. isolate AMX2 J3_scaffold_130160,
Gene Summary
Adenine Count
962026 bp
Thymine Count
959481 bp
Guanine Count
787390 bp
Cytosine Count
785037 bp
Genome Length
3493969 bp
Protein-coding Genes
3124 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1009 domain-containing protein | DCC43_09215 | Not Available | Positive | 2025159 - 2025977 | 30105.7 |
| hypothetical protein | DCC43_09220 | Not Available | Positive | 2026084 - 2026704 | 22220.1 |
| hypothetical protein | DCC43_09225 | Not Available | Negative | 2026929 - 2028751 | 64751.6 |
| hypothetical protein | DCC43_09230 | Not Available | Negative | 2029537 - 2029866 | 12535.3 |
| 2-isopropylmalate synthase | DCC43_09235 | Not Available | Positive | 2029890 - 2031392 | 54363.4 |
| shikimate dehydrogenase | DCC43_09240 | Not Available | Positive | 2031478 - 2032974 | 55397.7 |
| shikimate kinase | DCC43_09245 | Not Available | Positive | 2032987 - 2033535 | 20823.1 |
| duf2191 domain-containing protein | DCC43_09250 | Not Available | Positive | 2033762 - 2033959 | 7045.86 |
| vapc toxin family pin domain ribonuclease | DCC43_09255 | Not Available | Positive | 2033961 - 2034317 | 12899.0 |
| hypothetical protein | DCC43_09260 | Not Available | Negative | 2034451 - 2034750 | 11273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
