Marinilabilia rubra str. WTE16

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Marinilabilia

Description

Marinilabilia rubra str. WTE16 is a bacterium characterized by a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number QEWP00000000.1, indicating its availability for further research and study in genomic databases. As a member of the Marinilabilia genus, M. rubra str. WTE16 likely possesses traits typical of marine bacteria, including potential adaptations to saline environments and a role in nutrient cycling within marine ecosystems. The single replicon may confer certain advantages, such as reduced energy expenditure for replication and maintenance of genetic material. This organism’s ecological significance could be linked to its ability to thrive in marine settings, possibly contributing to the degradation of organic matter or the cycling of carbon and nutrients in oceanic environments. Understanding the genomic features and ecological roles of Marinilabilia rubra str. WTE16 could provide insights into the functioning of marine microbial communities and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusMarinilabilia
SpeciesMarinilabilia rubra
StrainWTE16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinilabilia rubra strain WTE16 Scaffold59, whole genome shotgun

Gene Summary

Adenine Count

1603733 bp

Thymine Count

1577397 bp

Guanine Count

1083873 bp

Cytosine Count

1112739 bp

Genome Length

5377742 bp

Protein-coding Genes

4013 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase fDDZ16_18055Not AvailablePositive4698902 - 470032955010.4
coenzyme a pyrophosphataseDDZ16_18060Not AvailableNegative4700479 - 470109322821.4
glutamate--trna ligaseDDZ16_18065Not AvailableNegative4701243 - 470277857717.7
adenosylcobalamin-dependent ribonucleoside-diphosphate reductaseDDZ16_18070Not AvailableNegative4702920 - 470547896205.0
3-deoxy-d-manno-octulosonic acid transferaseDDZ16_18075Not AvailableNegative4706992 - 470821846391.7
hypothetical proteinDDZ16_18080Not AvailablePositive4708678 - 47088577150.25
phosphoglycerate kinaseDDZ16_18085Not AvailableNegative4708957 - 471021645106.2
hypothetical proteinDDZ16_18090Not AvailableNegative4710498 - 471111823047.4
duf4296 domain-containing proteinDDZ16_18095Not AvailableNegative4711415 - 471227833250.4
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)DDZ16_18100Not AvailableNegative4712338 - 471343540886.2

Displaying genes 3571 – 3580 of 4068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.