Marinilabilia rubra str. WTE16

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinilabiliaceae

Genus

Marinilabilia

Description

Marinilabilia rubra str. WTE16 is a bacterium characterized by a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number QEWP00000000.1, indicating its availability for further research and study in genomic databases. As a member of the Marinilabilia genus, M. rubra str. WTE16 likely possesses traits typical of marine bacteria, including potential adaptations to saline environments and a role in nutrient cycling within marine ecosystems. The single replicon may confer certain advantages, such as reduced energy expenditure for replication and maintenance of genetic material. This organism’s ecological significance could be linked to its ability to thrive in marine settings, possibly contributing to the degradation of organic matter or the cycling of carbon and nutrients in oceanic environments. Understanding the genomic features and ecological roles of Marinilabilia rubra str. WTE16 could provide insights into the functioning of marine microbial communities and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinilabiliaceae
GenusMarinilabilia
SpeciesMarinilabilia rubra
StrainWTE16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinilabilia rubra strain WTE16 Scaffold59, whole genome shotgun

Gene Summary

Adenine Count

1603733 bp

Thymine Count

1577397 bp

Guanine Count

1083873 bp

Cytosine Count

1112739 bp

Genome Length

5377742 bp

Protein-coding Genes

4013 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3822 domain-containing proteinDDZ16_14675Not AvailablePositive3809186 - 381004032744.6
16s rrna (guanine(966)-n(2))-methyltransferase rsmdDDZ16_14680Not AvailablePositive3810031 - 381057020448.5
Trna-aspNot AvailableNot AvailablePositive3810707 - 3810783Not Available
Trna-aspNot AvailableNot AvailablePositive3810812 - 3810888Not Available
pyruvate kinaseDDZ16_14695Not AvailableNegative3811315 - 381275452660.3
type ii 3-dehydroquinate dehydrataseDDZ16_14700Not AvailableNegative3812780 - 381321716010.2
site-specific tyrosine recombinase xerdDDZ16_14705Not AvailablePositive3813512 - 381441134558.1
phosphoenolpyruvate carboxykinase (atp)DDZ16_14710Not AvailablePositive3815205 - 381682460086.9
tigr01777 family proteinDDZ16_14715Not AvailableNegative3816834 - 381769130974.6
mechanosensitive ion channel protein mscsDDZ16_14720Not AvailableNegative3817860 - 381921551632.1

Displaying genes 2911 – 2920 of 4068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.