Verrucomicrobia bacterium LW23

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Order

Family

Genus

Description

Verrucomicrobia bacterium LW23 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its efficiency in cellular processes, potentially allowing for rapid adaptation to environmental changes. The bacterium is indexed under the accession number QAZA00000000.1, which serves as a unique identifier for its genomic information in biological databases. The Verrucomicrobia phylum is known for its diverse ecological roles, often found in various environments, including soils and aquatic systems. This particular bacterium may contribute to nutrient cycling and organic matter decomposition, highlighting its potential significance in ecosystem functioning. The single replicon trait could also suggest a simplified regulatory mechanism for gene expression, which might enhance its adaptability in fluctuating environments. Overall, the study of Verrucomicrobia bacterium LW23 provides insights into the genomic simplicity and ecological roles of microorganisms within the Verrucomicrobia phylum. Understanding its traits and ecological interactions may further illuminate the contributions of this group to microbial diversity and ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucomicrobia bacterium LW23

Gene Summary

Adenine Count

1263732 bp

Thymine Count

1267820 bp

Guanine Count

2042002 bp

Cytosine Count

2039925 bp

Genome Length

6614109 bp

Protein-coding Genes

3399 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yggs family pyridoxal phosphate-dependent enzymeDB346_16235Not AvailableNegative2295624 - 229651432170.3
lysr family transcriptional regulatorDB346_16240Not AvailablePositive2296735 - 229765235028.0
transcriptional repressorDB346_16245Not AvailablePositive2297861 - 229836418872.4
hypothetical proteinDB346_16255Not AvailableNegative2300289 - 230193858465.8
hypothetical proteinDB346_16260Not AvailablePositive2302496 - 23026966707.11
polyphosphate kinase 1DB346_16265Not AvailablePositive2303304 - 230550283445.7
hypothetical proteinDB346_16270Not AvailablePositive2306041 - 230646315770.0
peptidaseDB346_16275Not AvailablePositive2306523 - 230806458255.5
glycoside hydrolase family 95DB346_16280Not AvailableNegative2308082 - 231039486484.3
hypothetical proteinDB346_16285Not AvailableNegative2310607 - 2313951121161.0

Displaying genes 1661 – 1670 of 3399 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

27 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002529(3S)-3-hydroxy-L-aspartateC4H6NO5Chemical structure of (3S)-3-hydroxy-L-aspartateNot available
Average148.095Da
Monoisotopic148.0251459Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da

Displaying 1–10 of 27 metabolites

Health Effects

No health effects information available for this bacterium.