Pseudoxanthomonas composti str. GSS15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas composti strain GSS15 exhibits a rod-shaped morphology and is characterized by a single replicon, indicating a simplified genetic structure. This trait can be significant in understanding its genetic stability and adaptability within various environments. The strain is cataloged under the accession number SAWZ00000000.1, which allows for its identification and retrieval from genomic databases for further research. The rod shape of Pseudoxanthomonas composti GSS15 may influence its movement and interaction with its surroundings, potentially affecting its ecological roles in the environments where it is found. Rod-shaped bacteria often have increased surface area-to-volume ratios compared to other shapes, which can enhance nutrient uptake and facilitate interactions with other microorganisms and substrates in their habitats. Additionally, the presence of a single replicon suggests a streamlined genetic organization that could contribute to efficient replication and metabolic processes. This could imply that Pseudoxanthomonas composti GSS15 has adapted to thrive in specific niches, possibly utilizing unique substrates or exhibiting particular metabolic capabilities that allow it to compete effectively within its ecological context. In summary, the rod shape and single replicon of Pseudoxanthomonas composti strain GSS15 provide insights into its potential ecological roles and adaptability. Understanding these traits can aid in further studies of its interactions within microbial communities and its contributions to biogeochemical processes in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas composti
StrainGSS15

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas composti strain GSS15 Scaffold25, whole genome

Gene Summary

Adenine Count

692425 bp

Thymine Count

687562 bp

Guanine Count

1478435 bp

Cytosine Count

1481974 bp

Genome Length

4342208 bp

Protein-coding Genes

3626 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive417 - 1961Not Available
succinate dehydrogenase, hydrophobic membrane anchor proteinEPA99_00005Not AvailableNegative233 - 61913888.5
succinate dehydrogenase, cytochrome b556 subunitEPA99_00010Not AvailableNegative616 - 100213997.4
duf4142 domain-containing proteinEPA99_00015Not AvailablePositive1260 - 186221345.2
23s ribosomal rnaNot AvailableNot AvailablePositive2507 - 5387Not Available
s9 family peptidaseEPA99_00020Not AvailableNegative2017 - 446789564.3
5s ribosomal rnaNot AvailableNot AvailablePositive5508 - 5622Not Available
alpha/beta hydrolaseEPA99_00025Not AvailableNegative5023 - 594633187.1
hamp domain-containing proteinEPA99_00030Not AvailableNegative6023 - 742050293.8
response regulator transcription factorEPA99_00035Not AvailableNegative7420 - 808524574.7

Displaying genes 1 – 10 of 3684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.