Pseudoxanthomonas composti str. GSS15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas composti strain GSS15 exhibits a rod-shaped morphology and is characterized by a single replicon, indicating a simplified genetic structure. This trait can be significant in understanding its genetic stability and adaptability within various environments. The strain is cataloged under the accession number SAWZ00000000.1, which allows for its identification and retrieval from genomic databases for further research. The rod shape of Pseudoxanthomonas composti GSS15 may influence its movement and interaction with its surroundings, potentially affecting its ecological roles in the environments where it is found. Rod-shaped bacteria often have increased surface area-to-volume ratios compared to other shapes, which can enhance nutrient uptake and facilitate interactions with other microorganisms and substrates in their habitats. Additionally, the presence of a single replicon suggests a streamlined genetic organization that could contribute to efficient replication and metabolic processes. This could imply that Pseudoxanthomonas composti GSS15 has adapted to thrive in specific niches, possibly utilizing unique substrates or exhibiting particular metabolic capabilities that allow it to compete effectively within its ecological context. In summary, the rod shape and single replicon of Pseudoxanthomonas composti strain GSS15 provide insights into its potential ecological roles and adaptability. Understanding these traits can aid in further studies of its interactions within microbial communities and its contributions to biogeochemical processes in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas composti
StrainGSS15

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas composti strain GSS15 Scaffold25, whole genome

Gene Summary

Adenine Count

692425 bp

Thymine Count

687562 bp

Guanine Count

1478435 bp

Cytosine Count

1481974 bp

Genome Length

4342208 bp

Protein-coding Genes

3626 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdEPA99_01080Not AvailableNegative274519 - 27638466083.5
preprotein translocase subunit yajcEPA99_01085Not AvailableNegative276479 - 27682312014.0
trna guanosine(34) transglycosylase tgtEPA99_01090Not AvailableNegative276959 - 27808641718.9
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaEPA99_01095Not AvailableNegative278083 - 27912938158.8
duf2974 domain-containing proteinEPA99_01100Not AvailableNegative279259 - 28067150952.6
hypothetical proteinEPA99_01105Not AvailableNegative280668 - 28134524666.0
lrp/asnc family transcriptional regulatorEPA99_01110Not AvailableNegative281524 - 28195515566.9
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeEPA99_01115Not AvailablePositive282128 - 28362753456.0
hypothetical proteinEPA99_01120Not AvailableNegative283782 - 28448926937.5
inorganic diphosphataseEPA99_01125Not AvailableNegative284683 - 28529421937.4

Displaying genes 221 – 230 of 3684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.