Sphingomonas sp. PP-F2F-A104-K0414

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PP-F2F-A104-K0414 is a rod-shaped bacterium distinguished by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number SLYD00000000.1, which provides a reference point for genomic and taxonomic studies. The rod shape of Sphingomonas sp. PP-F2F-A104-K0414 suggests a potential for rapid growth and division, characteristics that are often advantageous in nutrient-rich environments. The motility conferred by its flagella may enhance this ability, allowing the bacterium to navigate toward favorable conditions or away from harmful stimuli. In a broader biological or ecological context, the traits of Sphingomonas sp. PP-F2F-A104-K0414 may enable it to thrive in diverse ecological niches. The single replicon could indicate a specialization that allows it to efficiently utilize specific substrates or environmental resources. Understanding the characteristics of this strain can provide insights into its role in microbial communities, particularly in biogeochemical cycles or in the degradation of organic compounds. The combination of its shape, motility, and genetic organization highlights the potential adaptability of Sphingomonas sp. PP-F2F-A104-K0414 within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PP-F2F-A104-K0414
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PP-F2F-A104-K0414
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PP-F2F-A104-K0414 Ga0191680_124, whole genome

Gene Summary

Adenine Count

801821 bp

Thymine Count

793282 bp

Guanine Count

1467886 bp

Cytosine Count

1490383 bp

Genome Length

4553372 bp

Protein-coding Genes

4053 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane-bound lytic murein transglycosylase aC8J46_104238Not AvailableNegative2459829 - 246120247623.7
putative lipid-binding transport protein (tim44 family)C8J46_104239Not AvailableNegative2461205 - 246184923251.4
protein translocase subunit secbC8J46_104240Not AvailablePositive2462014 - 246252618404.7
putative peptidoglycan lipid ii flippaseC8J46_104241Not AvailablePositive2462552 - 246411756074.2
tryptophanyl-trna synthetaseC8J46_104242Not AvailablePositive2464127 - 246513436002.4
chromosomal replication initiator protein dnaaC8J46_104243Not AvailableNegative2465366 - 246688055720.8
ssu ribosomal protein s20pC8J46_104244Not AvailableNegative2467309 - 24675729322.38
dna-(apurinic or apyrimidinic site) lyaseC8J46_104245Not AvailableNegative2467680 - 246849529918.3
demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseC8J46_104246Not AvailablePositive2468552 - 246931628247.1
2-octaprenylphenol hydroxylaseC8J46_104247Not AvailablePositive2469552 - 247108756493.8

Displaying genes 2321 – 2330 of 4168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.