Sphingomonas sp. PP-CE-1A-559

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PP-CE-1A-559 is a rod-shaped bacterium that possesses flagella, which suggests it is motile. This motility may play a role in its ecological interactions and adaptability in various environments. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The accession number for Sphingomonas sp. PP-CE-1A-559 is SLYA00000000.1, which can be used for further genomic studies or comparisons with other strains within the Sphingomonas genus. This genus is known for its diverse metabolic capabilities and can often thrive in specialized ecological niches. The specific traits of Sphingomonas sp. PP-CE-1A-559, particularly its motility and genomic characteristics, suggest that it may play a significant role in biodegradation processes or in the cycling of nutrients in its environment. Its ability to move could enhance its interactions with various substrates, facilitating its involvement in nutrient cycling. Thus, Sphingomonas sp. PP-CE-1A-559 may contribute to ecological balance and the maintenance of microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PP-CE-1A-559
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PP-CE-1A-559
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PP-CE-1A-559 Ga0191671_136, whole genome shotgun

Gene Summary

Adenine Count

771069 bp

Thymine Count

770754 bp

Guanine Count

1423707 bp

Cytosine Count

1419408 bp

Genome Length

4385209 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle-docking protein ftsyC8J42_101678Not AvailableNegative755603 - 75653833172.2
threonylcarbamoyladenosine trna methylthiotransferase mtabC8J42_101679Not AvailableNegative756535 - 75778244754.9
diguanylate cyclase/phosphodiesteraseC8J42_101680Not AvailableNegative758109 - 75973458251.4
signal recognition particle subunit ffh/srp54 (srp54)C8J42_101681Not AvailablePositive760124 - 76166553592.3
ssu ribosomal protein s16pC8J42_101682Not AvailablePositive761734 - 76216215278.8
hypothetical proteinC8J42_101683Not AvailablePositive762404 - 7625444669.96
16s rrna processing protein rimmC8J42_101684Not AvailablePositive762522 - 76302217833.1
thioredoxin reductase (nadph)C8J42_101685Not AvailableNegative763119 - 76402431982.2
trna (guanine37-n(1)-) methyltransferaseC8J42_101686Not AvailablePositive764133 - 76486426522.4
lsu ribosomal protein l19pC8J42_101687Not AvailablePositive764861 - 76525314477.6

Displaying genes 801 – 810 of 4047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.