Sphingomonas sp. PP-CE-1A-559

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PP-CE-1A-559 is a rod-shaped bacterium that possesses flagella, which suggests it is motile. This motility may play a role in its ecological interactions and adaptability in various environments. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The accession number for Sphingomonas sp. PP-CE-1A-559 is SLYA00000000.1, which can be used for further genomic studies or comparisons with other strains within the Sphingomonas genus. This genus is known for its diverse metabolic capabilities and can often thrive in specialized ecological niches. The specific traits of Sphingomonas sp. PP-CE-1A-559, particularly its motility and genomic characteristics, suggest that it may play a significant role in biodegradation processes or in the cycling of nutrients in its environment. Its ability to move could enhance its interactions with various substrates, facilitating its involvement in nutrient cycling. Thus, Sphingomonas sp. PP-CE-1A-559 may contribute to ecological balance and the maintenance of microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PP-CE-1A-559
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PP-CE-1A-559
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PP-CE-1A-559 Ga0191671_136, whole genome shotgun

Gene Summary

Adenine Count

771069 bp

Thymine Count

770754 bp

Guanine Count

1423707 bp

Cytosine Count

1419408 bp

Genome Length

4385209 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent 3-hydroxy acid dehydrogenase ydfgC8J42_10690Not AvailableNegative3535615 - 353640627415.9
osmoprotectant transport system atp-binding proteinC8J42_10691Not AvailablePositive3536431 - 353722827914.9
osmoprotectant transport system permease proteinC8J42_10692Not AvailablePositive3537239 - 353878354109.3
hypothetical proteinC8J42_10693Not AvailableNegative3538774 - 353947523954.2
23s rrna m(2)a-2503 methyltransferaseC8J42_10694Not AvailableNegative3539525 - 354073044599.7
putative phosphoglycerate mutaseC8J42_10695Not AvailableNegative3541603 - 354228623954.5
outer membrane immunogenic proteinC8J42_10696Not AvailablePositive3542427 - 354308023122.7
dna polymerase iii beta subunitC8J42_10697Not AvailablePositive3543228 - 354434640377.7
uncharacterized protein ybjq (upf0145 family)C8J42_10698Not AvailablePositive3544343 - 354499022743.0
ubiquinone biosynthesis protein coq4C8J42_10699Not AvailablePositive3545172 - 354598129286.8

Displaying genes 3291 – 3300 of 4047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.