Sphingomonas sp. PP-CE-1A-559

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PP-CE-1A-559 is a rod-shaped bacterium that possesses flagella, which suggests it is motile. This motility may play a role in its ecological interactions and adaptability in various environments. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The accession number for Sphingomonas sp. PP-CE-1A-559 is SLYA00000000.1, which can be used for further genomic studies or comparisons with other strains within the Sphingomonas genus. This genus is known for its diverse metabolic capabilities and can often thrive in specialized ecological niches. The specific traits of Sphingomonas sp. PP-CE-1A-559, particularly its motility and genomic characteristics, suggest that it may play a significant role in biodegradation processes or in the cycling of nutrients in its environment. Its ability to move could enhance its interactions with various substrates, facilitating its involvement in nutrient cycling. Thus, Sphingomonas sp. PP-CE-1A-559 may contribute to ecological balance and the maintenance of microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PP-CE-1A-559
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PP-CE-1A-559
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PP-CE-1A-559 Ga0191671_136, whole genome shotgun

Gene Summary

Adenine Count

771069 bp

Thymine Count

770754 bp

Guanine Count

1423707 bp

Cytosine Count

1419408 bp

Genome Length

4385209 bp

Protein-coding Genes

3932 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzymeC8J42_102278Not AvailablePositive1482419 - 148280213007.4
s-formylglutathione hydrolaseC8J42_102279Not AvailablePositive1483120 - 148395330215.7
tonb-dependent receptor-like proteinC8J42_102280Not AvailableNegative1484368 - 1487427108671.0
gtp cyclohydrolase iC8J42_102281Not AvailablePositive1487592 - 148826924880.2
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8J42_102282Not AvailablePositive1488269 - 148903926187.1
dihydroneopterin aldolaseC8J42_102283Not AvailablePositive1489032 - 148938813243.3
putative intracellular protease/amidaseC8J42_102284Not AvailablePositive1489620 - 149029723341.6
2-isopropylmalate synthaseC8J42_102285Not AvailableNegative1490342 - 149200060369.3
polyisoprenoid-binding protein yceiC8J42_102286Not AvailableNegative1492195 - 149280020865.2
ketol-acid reductoisomeraseC8J42_102287Not AvailableNegative1493277 - 149429636561.7

Displaying genes 1471 – 1480 of 4047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.