Loktanella sp. PT4BL

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Loktanella

Description

Loktanella sp. PT4BL is characterized by a single replicon, indicating its genomic structure is relatively straightforward compared to other bacterial species that may possess multiple replicons. This trait can affect its genetic stability and adaptability in various environments. The accession number for this strain is QJJL00000000.1, which provides a unique identifier for researchers seeking to access its genomic data in biological databases. The monorepliconic nature of Loktanella sp. PT4BL suggests it may have a streamlined metabolic pathway, potentially allowing it to efficiently utilize available resources in its habitat. This could be advantageous in competitive environments where resource availability is limited. The simplicity of having one replicon may also facilitate quicker replication and evolution under certain selective pressures. From an ecological perspective, Loktanella species are typically known to inhabit marine environments. Their presence in specific ecological niches might contribute to the microbial community's functioning by participating in nutrient cycling and organic matter decomposition. The traits of Loktanella sp. PT4BL could indicate its role in these processes, although further research would be necessary to elucidate its specific contributions to marine ecosystems. Understanding its genomic framework and ecological interactions could provide insights into the adaptability and resilience of microbial communities in changing environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLoktanella
SpeciesLoktanella sp. PT4BL
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella sp. PT4BL Ga0206391_136, whole genome shotgun sequence.

Gene Summary

Adenine Count

821559 bp

Thymine Count

832291 bp

Guanine Count

1143041 bp

Cytosine Count

1123344 bp

Genome Length

3921447 bp

Protein-coding Genes

3943 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitt/taut family transport system atp-binding proteinC7964_11015Not AvailableNegative3544853 - 354564428923.2
nitt/taut family transport system permease proteinC7964_11016Not AvailableNegative3545644 - 354645329657.3
nitt/taut family transport system substrate-binding proteinC7964_11017Not AvailableNegative3546516 - 354757437802.9
tetr family transcriptional regulatorC7964_11018Not AvailablePositive3547724 - 354834723093.0
peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family)C7964_11019Not AvailablePositive3548380 - 354926433525.8
eama-like transporter family proteinC7964_11020Not AvailablePositive3549261 - 355012430301.3
hypothetical proteinC7964_11021Not AvailableNegative3550278 - 35504877694.43
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C7964_11022Not AvailableNegative3550820 - 355141920735.8
amino acid/amide abc transporter substrate-binding protein (haat family)C7964_11023Not AvailableNegative3551673 - 355288441643.5
amino acid/amide abc transporter atp-binding protein 2 (haat family)C7964_11024Not AvailableNegative3552925 - 355362925408.8

Displaying genes 3691 – 3700 of 4044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.