Loktanella sp. PT4BL

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Loktanella

Description

Loktanella sp. PT4BL is characterized by a single replicon, indicating its genomic structure is relatively straightforward compared to other bacterial species that may possess multiple replicons. This trait can affect its genetic stability and adaptability in various environments. The accession number for this strain is QJJL00000000.1, which provides a unique identifier for researchers seeking to access its genomic data in biological databases. The monorepliconic nature of Loktanella sp. PT4BL suggests it may have a streamlined metabolic pathway, potentially allowing it to efficiently utilize available resources in its habitat. This could be advantageous in competitive environments where resource availability is limited. The simplicity of having one replicon may also facilitate quicker replication and evolution under certain selective pressures. From an ecological perspective, Loktanella species are typically known to inhabit marine environments. Their presence in specific ecological niches might contribute to the microbial community's functioning by participating in nutrient cycling and organic matter decomposition. The traits of Loktanella sp. PT4BL could indicate its role in these processes, although further research would be necessary to elucidate its specific contributions to marine ecosystems. Understanding its genomic framework and ecological interactions could provide insights into the adaptability and resilience of microbial communities in changing environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLoktanella
SpeciesLoktanella sp. PT4BL
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella sp. PT4BL Ga0206391_136, whole genome shotgun sequence.

Gene Summary

Adenine Count

821559 bp

Thymine Count

832291 bp

Guanine Count

1143041 bp

Cytosine Count

1123344 bp

Genome Length

3921447 bp

Protein-coding Genes

3943 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitC7964_103310Not AvailablePositive2274757 - 227616049903.7
3-isopropylmalate/(r)-2-methylmalate dehydratase small subunitC7964_103311Not AvailablePositive2276247 - 227685222337.6
hypothetical proteinC7964_103312Not AvailablePositive2277158 - 227797029601.8
endonuclease/exonuclease/phosphatase family proteinC7964_103313Not AvailablePositive2278003 - 227899835217.5
3-isopropylmalate dehydrogenaseC7964_103314Not AvailablePositive2279072 - 228017539587.6
drug/metabolite transporter (dmt)-like permeaseC7964_103315Not AvailablePositive2280175 - 228116435210.9
glutamate synthase domain-containing protein 2C7964_103316Not AvailableNegative2281157 - 228277359058.9
chromosome partitioning proteinC7964_103317Not AvailableNegative2282870 - 228367930008.4
atp-dependent rna helicase rhleC7964_103318Not AvailablePositive2284047 - 228535746330.5
diguanylate cyclase (ggdef)-like proteinC7964_103319Not AvailablePositive2285698 - 228650729970.6

Displaying genes 2361 – 2370 of 4044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.