Pantoea sp. PNA 03-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. PNA 03-3 is a bacterium characterized by the presence of flagella, which are structures that enable motility in liquid environments. This trait is significant as it may facilitate the bacterium's ability to colonize various ecological niches and interact with other microorganisms. The genomic analysis of Pantoea sp. PNA 03-3 reveals that it contains a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in resource utilization. The accession number for this strain is QICO00000000.1, which serves as a reference for researchers seeking to explore its genetic makeup or compare it to other strains within the Pantoea genus. Understanding the motility and genetic structure of Pantoea sp. PNA 03-3 can provide insights into its ecological role. As a member of the Pantoea genus, this strain is likely involved in nutrient cycling and may interact with plants or other microorganisms in its environment. The presence of flagella suggests that it can actively move toward nutrients or away from unfavorable conditions, enhancing its survival and competitive abilities in diverse habitats. This motility could also facilitate interactions with plant roots, potentially influencing plant health or soil microbiome dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. PNA 03-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. PNA 03-3 Ga0215838_122, whole genome shotgun sequence.

Gene Summary

Adenine Count

1143158 bp

Thymine Count

1140313 bp

Guanine Count

1321974 bp

Cytosine Count

1326511 bp

Genome Length

4932888 bp

Protein-coding Genes

4555 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malate dehydrogenase (oxaloacetate-decarboxylating)C7433_103395Not AvailableNegative2546507 - 254820462629.1
cytidine deaminaseC7433_103396Not AvailableNegative2548375 - 254925931431.5
putative murein hydrolase (tigr00659 family)C7433_103397Not AvailableNegative2549378 - 255007024187.6
holin-like proteinC7433_103398Not AvailableNegative2550063 - 255045514291.2
methionyl-trna synthetaseC7433_103399Not AvailableNegative2550571 - 255260475573.4
atp-binding protein involved in chromosome partitioningC7433_103400Not AvailablePositive2552778 - 255389040062.6
ribosomal protein s18 acetylase rimi-like enzymeC7433_103401Not AvailableNegative2553887 - 255434217193.2
peroxiredoxin (alkyl hydroperoxide reductase subunit c)C7433_103402Not AvailablePositive2554678 - 255524120654.4
alkyl hydroperoxide reductase subunit fC7433_103403Not AvailablePositive2555314 - 255688256043.1
hypothetical proteinC7433_103404Not AvailableNegative2556930 - 255788934570.9

Displaying genes 2431 – 2440 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.