Pantoea sp. PNA 03-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. PNA 03-3 is a bacterium characterized by the presence of flagella, which are structures that enable motility in liquid environments. This trait is significant as it may facilitate the bacterium's ability to colonize various ecological niches and interact with other microorganisms. The genomic analysis of Pantoea sp. PNA 03-3 reveals that it contains a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in resource utilization. The accession number for this strain is QICO00000000.1, which serves as a reference for researchers seeking to explore its genetic makeup or compare it to other strains within the Pantoea genus. Understanding the motility and genetic structure of Pantoea sp. PNA 03-3 can provide insights into its ecological role. As a member of the Pantoea genus, this strain is likely involved in nutrient cycling and may interact with plants or other microorganisms in its environment. The presence of flagella suggests that it can actively move toward nutrients or away from unfavorable conditions, enhancing its survival and competitive abilities in diverse habitats. This motility could also facilitate interactions with plant roots, potentially influencing plant health or soil microbiome dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. PNA 03-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. PNA 03-3 Ga0215838_122, whole genome shotgun sequence.

Gene Summary

Adenine Count

1143158 bp

Thymine Count

1140313 bp

Guanine Count

1321974 bp

Cytosine Count

1326511 bp

Genome Length

4932888 bp

Protein-coding Genes

4555 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil-dna glycosylaseC7433_10313Not AvailableNegative2117968 - 211865725413.4
autonomous glycyl radical cofactorC7433_10314Not AvailablePositive2118915 - 211929814308.0
atp-dependent rna helicase srmbC7433_10315Not AvailableNegative2119507 - 212083549753.9
trna1val (adenine37-n6)-methyltransferaseC7433_10316Not AvailablePositive2121006 - 212175227508.6
l-aspartate oxidaseC7433_10317Not AvailableNegative2121737 - 212339862060.0
rna polymerase rpoe-like sigma-24 subunitC7433_10318Not AvailablePositive2123759 - 212433721767.0
sigma-e factor negative regulatory protein rseaC7433_10319Not AvailablePositive2124364 - 212501724054.4
mucb/rseb-like sigma(e) regulatory proteinC7433_10320Not AvailablePositive2125017 - 212597335412.3
rsec/mucc-like positive regulator of sigma(e)C7433_10321Not AvailablePositive2125970 - 212643416151.9
gtp-binding protein lepaC7433_10322Not AvailablePositive2126654 - 212845366417.0

Displaying genes 2051 – 2060 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.