Pantoea sp. PNA 03-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. PNA 03-3 is a bacterium characterized by the presence of flagella, which are structures that enable motility in liquid environments. This trait is significant as it may facilitate the bacterium's ability to colonize various ecological niches and interact with other microorganisms. The genomic analysis of Pantoea sp. PNA 03-3 reveals that it contains a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in resource utilization. The accession number for this strain is QICO00000000.1, which serves as a reference for researchers seeking to explore its genetic makeup or compare it to other strains within the Pantoea genus. Understanding the motility and genetic structure of Pantoea sp. PNA 03-3 can provide insights into its ecological role. As a member of the Pantoea genus, this strain is likely involved in nutrient cycling and may interact with plants or other microorganisms in its environment. The presence of flagella suggests that it can actively move toward nutrients or away from unfavorable conditions, enhancing its survival and competitive abilities in diverse habitats. This motility could also facilitate interactions with plant roots, potentially influencing plant health or soil microbiome dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. PNA 03-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. PNA 03-3 Ga0215838_122, whole genome shotgun sequence.

Gene Summary

Adenine Count

1143158 bp

Thymine Count

1140313 bp

Guanine Count

1321974 bp

Cytosine Count

1326511 bp

Genome Length

4932888 bp

Protein-coding Genes

4555 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease adaptor protein clpsC7433_1011020Not AvailableNegative1085389 - 108570912259.7
putative cold-shock dna-binding proteinC7433_1011021Not AvailablePositive1086028 - 10862528018.51
putative atp-dependent endonuclease of old familyC7433_1011022Not AvailableNegative1086320 - 108796962102.0
uncharacterized membrane protein ybje (duf340 family)C7433_1011023Not AvailablePositive1088087 - 108900433063.0
pyruvate dehydrogenase (quinone)C7433_1011024Not AvailablePositive1089128 - 109084961730.3
l-threonine aldolaseC7433_1011025Not AvailablePositive1090912 - 109197338261.8
n-acetyl-anhydromuramyl-l-alanine amidase ampdC7433_1011026Not AvailableNegative1092001 - 109280129456.0
uncharacterized protein ybjq (upf0145 family)C7433_1011027Not AvailableNegative1092822 - 109314211370.7
uncharacterized protein duf3828C7433_1011028Not AvailablePositive1093248 - 109378719533.3
l-arginine abc transporter atp-binding proteinC7433_1011029Not AvailablePositive1094010 - 109473826971.5

Displaying genes 1081 – 1090 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.