Clostridium sp. NJ4

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. NJ4 is characterized by having a single replicon, which indicates a relatively simple genomic structure. The organism has been assigned the accession number PYBN00000000.1, providing a reference for genetic and genomic studies. Clostridium species are known for their diverse metabolic capabilities, often thriving in anaerobic environments. While specific metabolic traits of Clostridium sp. NJ4 are not provided, members of this genus are commonly associated with processes such as fermentation, which can impact nutrient cycling in various ecosystems. The presence of a single replicon suggests that Clostridium sp. NJ4 may have streamlined genetic pathways, which could be advantageous in specific ecological niches where efficiency in resource utilization is critical. This trait may allow for rapid adaptation to environmental changes, enhancing its survival in competitive microbial communities. Understanding the genomic characteristics of Clostridium sp. NJ4 through the provided accession number can facilitate further research into its ecological roles and potential applications. In summary, the single replicon of Clostridium sp. NJ4 highlights its potential for specialized metabolic functions, which may contribute to its ecological interactions and roles within anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. NJ4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. NJ4 scaffold22, whole genome shotgun sequence.

Gene Summary

Adenine Count

1455137 bp

Thymine Count

1375748 bp

Guanine Count

682725 bp

Cytosine Count

573261 bp

Genome Length

4086940 bp

Protein-coding Genes

3830 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tatd family deoxyribonucleaseC7T89_15045Not AvailableNegative3087169 - 308792729484.6
phosphoribosylamine--glycine ligaseC7T89_15050Not AvailableNegative3088172 - 308942245756.1
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseC7T89_15055Not AvailableNegative3089662 - 309116155240.8
phosphoribosylglycinamide formyltransferaseC7T89_15060Not AvailableNegative3091214 - 309182822455.7
phosphoribosylformylglycinamidine cyclo-ligaseC7T89_15065Not AvailableNegative3091816 - 309281435433.8
amidophosphoribosyltransferaseC7T89_15070Not AvailableNegative3092838 - 309426551612.2
phosphoribosylaminoimidazolesuccinocarboxamide synthaseC7T89_15075Not AvailableNegative3094370 - 309507726959.3
5-(carboxyamino)imidazole ribonucleotide mutaseC7T89_15080Not AvailableNegative3095079 - 309555817150.0
hypothetical proteinC7T89_15085Not AvailableNegative3095846 - 309816783106.5
mannose-6-phosphate isomeraseC7T89_15090Not AvailableNegative3098462 - 309892617577.8

Displaying genes 3021 – 3030 of 3974 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.