Clostridium sp. NJ4

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. NJ4 is characterized by having a single replicon, which indicates a relatively simple genomic structure. The organism has been assigned the accession number PYBN00000000.1, providing a reference for genetic and genomic studies. Clostridium species are known for their diverse metabolic capabilities, often thriving in anaerobic environments. While specific metabolic traits of Clostridium sp. NJ4 are not provided, members of this genus are commonly associated with processes such as fermentation, which can impact nutrient cycling in various ecosystems. The presence of a single replicon suggests that Clostridium sp. NJ4 may have streamlined genetic pathways, which could be advantageous in specific ecological niches where efficiency in resource utilization is critical. This trait may allow for rapid adaptation to environmental changes, enhancing its survival in competitive microbial communities. Understanding the genomic characteristics of Clostridium sp. NJ4 through the provided accession number can facilitate further research into its ecological roles and potential applications. In summary, the single replicon of Clostridium sp. NJ4 highlights its potential for specialized metabolic functions, which may contribute to its ecological interactions and roles within anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. NJ4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. NJ4 scaffold22, whole genome shotgun sequence.

Gene Summary

Adenine Count

1455137 bp

Thymine Count

1375748 bp

Guanine Count

682725 bp

Cytosine Count

573261 bp

Genome Length

4086940 bp

Protein-coding Genes

3830 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseC7T89_08525Not AvailableNegative1683628 - 168409516593.3
hypothetical proteinC7T89_08530Not AvailableNegative1684217 - 16843906755.3
polysaccharide deacetylase family proteinC7T89_08535Not AvailablePositive1684669 - 168555634544.6
metal-binding proteinC7T89_08545Not AvailableNegative1687871 - 16881139080.74
hypothetical proteinC7T89_08550Not AvailablePositive1688525 - 168882111457.7
bon domain-containing proteinC7T89_08555Not AvailableNegative1688884 - 168932115583.2
ydcf family proteinC7T89_08560Not AvailablePositive1689474 - 169025329353.7
permeaseC7T89_08565Not AvailableNegative1690282 - 169161647721.8
methyl-accepting chemotaxis proteinC7T89_08570Not AvailablePositive1691909 - 169361861386.8
cation:proton antiporterC7T89_08575Not AvailableNegative1693709 - 169489041949.5

Displaying genes 1731 – 1740 of 3974 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.