Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | BerOc1_00030 | Not Available | Negative | 31702 - 31902 | 7870.83 |
| hypothetical protein | BerOc1_00031 | Not Available | Negative | 32083 - 32253 | 6269.8 |
| dna-binding protein hrl53 | BerOc1_00032 | Not Available | Negative | 32268 - 32540 | 9852.22 |
| ribosomal rna small subunit methyltransferase a | BerOc1_00033 | Not Available | Negative | 32814 - 33599 | 29477.8 |
| adenine phosphoribosyltransferase | BerOc1_00034 | Not Available | Positive | 33713 - 34234 | 19125.3 |
| s-methyl-5'-thioinosine phosphorylase | BerOc1_00035 | Not Available | Positive | 34247 - 34996 | 27428.8 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | BerOc1_00036 | Not Available | Positive | 35000 - 36349 | 48446.3 |
| hypothetical protein | BerOc1_00037 | Not Available | Positive | 36479 - 36766 | 10308.5 |
| succinyl-diaminopimelate desuccinylase | BerOc1_00038 | Not Available | Positive | 36868 - 38091 | 44630.1 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | BerOc1_00039 | Not Available | Positive | 38105 - 39988 | 68747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
