Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid transport system permease protein livh | BerOc1_00944 | Not Available | Positive | 1036634 - 1038253 | 57915.5 |
| leucine/isoleucine/valine transporter permease subunit | BerOc1_00945 | Not Available | Positive | 1038255 - 1039409 | 42085.6 |
| lipopolysaccharide export system atp-binding protein lptb | BerOc1_00946 | Not Available | Positive | 1039413 - 1040207 | 29117.3 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | BerOc1_00947 | Not Available | Positive | 1040209 - 1040904 | 25426.0 |
| urease accessory protein ured | BerOc1_00948 | Not Available | Positive | 1040906 - 1041766 | 31086.1 |
| urease subunit gamma | BerOc1_00949 | Not Available | Positive | 1041785 - 1042087 | 11148.7 |
| urease subunit beta | BerOc1_00950 | Not Available | Positive | 1042097 - 1042405 | 11170.2 |
| urease subunit alpha 1 | BerOc1_00951 | Not Available | Positive | 1042415 - 1044118 | 60430.2 |
| urease accessory protein uree | BerOc1_00952 | Not Available | Positive | 1044121 - 1044594 | 17411.4 |
| urease accessory protein uref | BerOc1_00953 | Not Available | Positive | 1044591 - 1045262 | 24078.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
