Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | BerOc1_00874 | Not Available | Negative | 961229 - 962071 | 31474.4 |
| inner membrane abc transporter permease protein ydcv | BerOc1_00875 | Not Available | Negative | 962071 - 962925 | 31580.8 |
| spermidine/putrescine transport system permease protein potb | BerOc1_00876 | Not Available | Negative | 962922 - 963776 | 32142.3 |
| sulfate/thiosulfate import atp-binding protein cysa | BerOc1_00877 | Not Available | Negative | 963780 - 964865 | 40003.2 |
| spermidine/putrescine-binding periplasmic protein precursor | BerOc1_00878 | Not Available | Negative | 964950 - 966008 | 39239.1 |
| ethanolamine ammonia-lyase light chain | BerOc1_00879 | Not Available | Negative | 966104 - 966943 | 29924.7 |
| ethanolamine ammonia-lyase heavy chain | BerOc1_00880 | Not Available | Negative | 966927 - 968315 | 49646.5 |
| indole-3-acetyl-aspartic acid hydrolase | BerOc1_00881 | Not Available | Negative | 968576 - 969913 | 46934.2 |
| hypothetical protein | BerOc1_00882 | Not Available | Negative | 970103 - 970399 | 10836.8 |
| glutamate synthase | BerOc1_00883 | Not Available | Negative | 970593 - 971828 | 45119.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
