Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein ydcv | BerOc1_00833 | Not Available | Positive | 911168 - 911950 | 28868.1 |
| d-hydantoinase/dihydropyrimidinase | BerOc1_00834 | Not Available | Positive | 911971 - 913371 | 51041.9 |
| limonene hydroxylase | BerOc1_00835 | Not Available | Negative | 913623 - 915389 | 65345.4 |
| tripartite atp-independent periplasmic transporter, dctq component | BerOc1_00836 | Not Available | Positive | 915742 - 916281 | 19738.6 |
| sialic acid trap transporter permease protein siat | BerOc1_00837 | Not Available | Positive | 916281 - 917564 | 45116.8 |
| sialic acid-binding periplasmic protein siap precursor | BerOc1_00838 | Not Available | Positive | 917589 - 918623 | 37201.1 |
| threonine synthase | BerOc1_00839 | Not Available | Positive | 918695 - 919978 | 45608.4 |
| cysteine synthase | BerOc1_00840 | Not Available | Positive | 919999 - 921465 | 53919.2 |
| succinyl-diaminopimelate desuccinylase | BerOc1_00841 | Not Available | Positive | 921474 - 922667 | 42324.6 |
| n-acyl-d-aspartate deacylase | BerOc1_00842 | Not Available | Positive | 922684 - 924273 | 57727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
