Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin rtx-i translocation atp-binding protein | BerOc1_00773 | Not Available | Negative | 840434 - 842632 | 80370.8 |
| phenolphthiocerol synthesis polyketide synthase type i pks15/1 | BerOc1_00774 | Not Available | Negative | 843214 - 844209 | 34419.2 |
| ribosomal protein s12 methylthiotransferase rimo | BerOc1_00775 | Not Available | Positive | 844369 - 846189 | 66554.2 |
| nitrogen fixation protein vnfa | BerOc1_00776 | Not Available | Positive | 846348 - 847931 | 59158.7 |
| hypothetical protein | BerOc1_00777 | Not Available | Negative | 848406 - 848741 | 12598.1 |
| femo cofactor biosynthesis protein nifb | BerOc1_00778 | Not Available | Negative | 848863 - 850131 | 45398.9 |
| nitrogenase molybdenum-iron protein beta chain | BerOc1_00779 | Not Available | Negative | 850226 - 851593 | 49543.4 |
| nitrogenase molybdenum-iron protein alpha chain | BerOc1_00780 | Not Available | Negative | 851586 - 852980 | 51017.4 |
| acetyltransferase (gnat) family protein | BerOc1_00781 | Not Available | Negative | 853004 - 853435 | 15430.7 |
| ferredoxin, 2fe-2s | BerOc1_00782 | Not Available | Negative | 853452 - 853754 | 10978.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
