Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00733 | Not Available | Positive | 783256 - 783876 | 22507.7 |
| sodium-dependent dicarboxylate transporter sdcs | BerOc1_00734 | Not Available | Positive | 783920 - 785719 | 64180.6 |
| na(+)/h(+) antiporter nhab | BerOc1_00735 | Not Available | Positive | 785903 - 787525 | 58737.3 |
| methylglyoxal synthase | BerOc1_00736 | Not Available | Negative | 787629 - 788096 | 17547.8 |
| bacterioferritin | BerOc1_00737 | Not Available | Positive | 788361 - 788894 | 20259.7 |
| succinate-semialdehyde dehydrogenase | BerOc1_00738 | Not Available | Negative | 788977 - 790341 | 48189.9 |
| udp-glucose 4-epimerase | BerOc1_00739 | Not Available | Positive | 790644 - 791675 | 37902.9 |
| pilz domain protein | BerOc1_00740 | Not Available | Negative | 791819 - 792331 | 19642.5 |
| hypothetical protein | BerOc1_00741 | Not Available | Negative | 792804 - 793259 | 16758.4 |
| transcriptional regulatory protein zrar | BerOc1_00742 | Not Available | Negative | 793334 - 794758 | 53421.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
