Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m50 | BerOc1_00683 | Not Available | Positive | 724964 - 725605 | 23050.9 |
| tryptophan--trna ligase | BerOc1_00684 | Not Available | Positive | 725661 - 726620 | 36735.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | BerOc1_00685 | Not Available | Positive | 726690 - 727118 | 15516.1 |
| aspartate aminotransferase | BerOc1_00686 | Not Available | Positive | 727196 - 728371 | 43956.6 |
| hypothetical protein | BerOc1_00687 | Not Available | Negative | 728754 - 729368 | 21782.5 |
| late competence development protein comfb | BerOc1_00688 | Not Available | Positive | 729519 - 729818 | 11286.7 |
| transcriptional regulator slya | BerOc1_00689 | Not Available | Negative | 730076 - 730546 | 17972.6 |
| atp-dependent dna helicase uvrd2 | BerOc1_00690 | Not Available | Positive | 730642 - 733740 | 114944.0 |
| hypothetical protein | BerOc1_00691 | Not Available | Negative | 733737 - 733880 | 5840.23 |
| hypothetical protein | BerOc1_00692 | Not Available | Positive | 733949 - 734782 | 30875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
