Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminodeoxychorismate lyase | BerOc1_00673 | Not Available | Positive | 716394 - 717458 | 39776.8 |
| ppx/gppa phosphatase family protein | BerOc1_00674 | Not Available | Positive | 717831 - 718556 | 26740.0 |
| signal peptidase i p | BerOc1_00675 | Not Available | Negative | 718567 - 719409 | 31035.9 |
| threonine synthase | BerOc1_00676 | Not Available | Negative | 719427 - 720545 | 39155.1 |
| enamine/imine deaminase | BerOc1_00677 | Not Available | Negative | 720542 - 720940 | 14134.7 |
| putative glycosyltransferase epse | BerOc1_00678 | Not Available | Negative | 721006 - 722025 | 37443.3 |
| trna 2-thiocytidine biosynthesis protein ttca | BerOc1_00679 | Not Available | Negative | 722030 - 722947 | 34009.9 |
| hypothetical protein | BerOc1_00680 | Not Available | Negative | 722962 - 723159 | 7168.87 |
| sporulation initiation phosphotransferase f | BerOc1_00681 | Not Available | Positive | 723366 - 723737 | 13932.7 |
| cyclic di-gmp phosphodiesterase response regulator rpfg | BerOc1_00682 | Not Available | Positive | 723921 - 724889 | 36260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
