Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-n-acetylmuramic acid deacetylase pdac | BerOc1_00663 | Not Available | Positive | 701214 - 701924 | 25793.1 |
| methyl-accepting chemotaxis protein i | BerOc1_00664 | Not Available | Negative | 702020 - 704191 | 78469.3 |
| d-3-phosphoglycerate dehydrogenase | BerOc1_00665 | Not Available | Negative | 704356 - 705540 | 42552.1 |
| soluble hydrogenase 42 kda subunit | BerOc1_00666 | Not Available | Negative | 705577 - 706716 | 41228.5 |
| methyl-accepting chemotaxis protein ii | BerOc1_00667 | Not Available | Positive | 706986 - 708932 | 69664.5 |
| hypothetical protein | BerOc1_00668 | Not Available | Positive | 709287 - 710810 | 57934.9 |
| putative fad-linked oxidoreductase | BerOc1_00669 | Not Available | Positive | 711093 - 714614 | 130235.0 |
| hypothetical protein | BerOc1_00670 | Not Available | Negative | 714624 - 715661 | 38692.9 |
| hypothetical protein | BerOc1_00671 | Not Available | Positive | 715855 - 716004 | 5384.46 |
| putative holliday junction resolvase | BerOc1_00672 | Not Available | Positive | 716005 - 716418 | 14930.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
