Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase alpha subunit | BerOc1_00643 | Not Available | Negative | 683077 - 684129 | 38740.7 |
| 50s ribosomal protein l20 | BerOc1_00644 | Not Available | Negative | 684133 - 684486 | 13551.0 |
| 50s ribosomal protein l35 | BerOc1_00645 | Not Available | Negative | 684666 - 684863 | 7544.49 |
| translation initiation factor if-3 | BerOc1_00646 | Not Available | Negative | 684906 - 685436 | 20555.3 |
| threonine--trna ligase 2 | BerOc1_00647 | Not Available | Negative | 685438 - 687423 | 74625.1 |
| Trna-val | Not Available | Not Available | Positive | 687594 - 687668 | Not Available |
| glyoxalase-like domain protein | BerOc1_00649 | Not Available | Positive | 687866 - 688267 | 15013.9 |
| hypothetical protein | BerOc1_00650 | Not Available | Negative | 688380 - 689069 | 26141.5 |
| photosystem i assembly protein ycf3 | BerOc1_00651 | Not Available | Negative | 689154 - 689780 | 23242.3 |
| hypothetical protein | BerOc1_00652 | Not Available | Negative | 689796 - 690161 | 14751.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
