Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgb | BerOc1_00633 | Not Available | Positive | 671994 - 672404 | 15410.4 |
| flagellar basal-body rod protein flgc | BerOc1_00634 | Not Available | Positive | 672405 - 672845 | 16345.5 |
| flagellar hook-basal body complex protein flie | BerOc1_00635 | Not Available | Positive | 672863 - 673192 | 12240.1 |
| flagellar m-ring protein | BerOc1_00636 | Not Available | Positive | 673243 - 674835 | 58916.2 |
| flagellar motor switch protein flig | BerOc1_00637 | Not Available | Positive | 674839 - 675837 | 36788.4 |
| yop proteins translocation protein l | BerOc1_00638 | Not Available | Positive | 675824 - 676573 | 28135.6 |
| putative atp synthase yscn | BerOc1_00639 | Not Available | Positive | 676576 - 677994 | 50418.1 |
| putative assembly protein | BerOc1_00640 | Not Available | Negative | 677991 - 679763 | 61754.9 |
| hth-type transcriptional repressor ycge | BerOc1_00641 | Not Available | Negative | 679790 - 680098 | 12123.7 |
| phenylalanine--trna ligase beta subunit | BerOc1_00642 | Not Available | Negative | 680442 - 682844 | 89101.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
