Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00593 | Not Available | Positive | 627635 - 628024 | 14153.4 |
| peptidyl-prolyl cis-trans isomerase b | BerOc1_00594 | Not Available | Positive | 628152 - 628697 | 19586.7 |
| autoinducer 2 sensor kinase/phosphatase luxq | BerOc1_00595 | Not Available | Positive | 628910 - 631117 | 81284.0 |
| long-chain-fatty-acid--coa ligase | BerOc1_00596 | Not Available | Negative | 631141 - 633012 | 69443.6 |
| aspartate racemase | BerOc1_00597 | Not Available | Negative | 633153 - 633842 | 24578.9 |
| branched-chain amino acid transport protein (azld) | BerOc1_00598 | Not Available | Negative | 633852 - 634178 | 11749.8 |
| inner membrane protein ygaz | BerOc1_00599 | Not Available | Negative | 634163 - 634873 | 24742.5 |
| putative hth-type transcriptional regulator yjir | BerOc1_00600 | Not Available | Positive | 635013 - 636437 | 52445.6 |
| eama-like transporter family protein | BerOc1_00601 | Not Available | Positive | 636519 - 637442 | 33809.3 |
| putative hth-type transcriptional regulator | BerOc1_00602 | Not Available | Positive | 637518 - 637835 | 11662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
