Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00573 | Not Available | Positive | 601919 - 603469 | 58119.3 |
| Trna-ala | Not Available | Not Available | Positive | 603507 - 603582 | Not Available |
| bacterial extracellular solute-binding protein, family 3 | BerOc1_00575 | Not Available | Negative | 603646 - 604380 | 27916.7 |
| limonene hydroxylase | BerOc1_00576 | Not Available | Positive | 604663 - 606384 | 62979.7 |
| 5-aminovalerate aminotransferase davt | BerOc1_00577 | Not Available | Positive | 606772 - 608073 | 45603.2 |
| putative oxidoreductase ydhv | BerOc1_00578 | Not Available | Positive | 608080 - 609852 | 63603.8 |
| spermidine/putrescine import atp-binding protein pota | BerOc1_00579 | Not Available | Positive | 609863 - 610885 | 38075.1 |
| spermidine/putrescine transport system permease protein potb | BerOc1_00580 | Not Available | Positive | 610878 - 611798 | 34362.7 |
| inner membrane abc transporter permease protein ydcv | BerOc1_00581 | Not Available | Positive | 611800 - 612621 | 30090.0 |
| spermidine/putrescine-binding periplasmic protein precursor | BerOc1_00582 | Not Available | Positive | 612614 - 613654 | 39060.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
