Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylthioribulose-1-phosphate dehydratase | BerOc1_00563 | Not Available | Positive | 593326 - 594498 | 42400.6 |
| caax amino terminal protease self- immunity | BerOc1_00564 | Not Available | Positive | 594491 - 595393 | 32237.3 |
| rubredoxin | BerOc1_00565 | Not Available | Negative | 595828 - 595983 | 5886.75 |
| holliday junction atp-dependent dna helicase ruvb | BerOc1_00566 | Not Available | Negative | 596065 - 597051 | 36524.4 |
| holliday junction atp-dependent dna helicase ruva | BerOc1_00567 | Not Available | Negative | 597048 - 597659 | 21719.4 |
| hypothetical protein | BerOc1_00568 | Not Available | Positive | 597818 - 598372 | 19934.8 |
| amidohydrolase | BerOc1_00569 | Not Available | Negative | 598453 - 599829 | 51743.4 |
| crossover junction endodeoxyribonuclease ruvc | BerOc1_00570 | Not Available | Negative | 599950 - 600453 | 17813.9 |
| transcriptional regulatory protein pmpr | BerOc1_00571 | Not Available | Negative | 600459 - 601205 | 26906.4 |
| ribosomal rna large subunit methyltransferase e | BerOc1_00572 | Not Available | Negative | 601259 - 601858 | 22434.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
