Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate binding protein | BerOc1_00020 | Not Available | Positive | 20036 - 20986 | 33521.7 |
| ribose abc transporter permease protein | BerOc1_00021 | Not Available | Positive | 21113 - 22012 | 31322.2 |
| energy-coupling factor transporter atp-binding protein ecfa2 | BerOc1_00022 | Not Available | Positive | 22009 - 22803 | 28822.2 |
| nucleoside diphosphate kinase | BerOc1_00023 | Not Available | Positive | 22884 - 23306 | 15273.5 |
| pyrroline-5-carboxylate reductase | BerOc1_00024 | Not Available | Positive | 23306 - 24109 | 28948.1 |
| cobalamin biosynthesis protein cbib | BerOc1_00025 | Not Available | Negative | 24410 - 25363 | 34378.5 |
| rna polymerase sigma factor rpod | BerOc1_00026 | Not Available | Negative | 25414 - 27165 | 67084.5 |
| dna primase | BerOc1_00027 | Not Available | Negative | 27152 - 28909 | 66013.5 |
| endonuclease muts2 | BerOc1_00028 | Not Available | Negative | 28931 - 31228 | 84565.4 |
| yqey-like protein | BerOc1_00029 | Not Available | Negative | 31252 - 31698 | 16097.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
