Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu | BerOc1_00543 | Not Available | Negative | 573910 - 574182 | 9503.6 |
| rlpa-like protein precursor | BerOc1_00544 | Not Available | Negative | 574345 - 575085 | 26786.2 |
| bacterial extracellular solute-binding protein, family 3 | BerOc1_00545 | Not Available | Positive | 575263 - 576039 | 29097.2 |
| aspartate ammonia-lyase | BerOc1_00546 | Not Available | Negative | 576041 - 577450 | 51412.3 |
| tyrosine-specific transport protein | BerOc1_00547 | Not Available | Negative | 577463 - 578737 | 44847.7 |
| hypothetical protein | BerOc1_00548 | Not Available | Positive | 578847 - 579806 | 34965.8 |
| gtp-binding protein typa/bipa | BerOc1_00549 | Not Available | Positive | 579936 - 581783 | 68667.2 |
| molybdate abc transporter periplasmic substrate-binding protein | BerOc1_00550 | Not Available | Positive | 581978 - 582952 | 35545.0 |
| sulfate transport system permease protein cysw | BerOc1_00551 | Not Available | Positive | 582992 - 583783 | 28327.7 |
| sulfate/thiosulfate import atp-binding protein cysa | BerOc1_00552 | Not Available | Positive | 583780 - 584832 | 38702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
