Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chey | BerOc1_00473 | Not Available | Negative | 478103 - 478498 | 14777.8 |
| ribonuclease bn | BerOc1_00474 | Not Available | Negative | 478609 - 479490 | 32355.6 |
| ribonuclease y | BerOc1_00475 | Not Available | Negative | 479490 - 480353 | 31134.6 |
| comec family competence protein | BerOc1_00476 | Not Available | Negative | 480404 - 483019 | 92786.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | BerOc1_00477 | Not Available | Negative | 483298 - 484554 | 44524.4 |
| Trna-his | Not Available | Not Available | Positive | 484623 - 484698 | Not Available |
| hypothetical protein | BerOc1_00479 | Not Available | Negative | 484706 - 485455 | 26201.3 |
| selenocysteine-specific elongation factor | BerOc1_00480 | Not Available | Negative | 485487 - 487394 | 69939.8 |
| threonine efflux protein | BerOc1_00481 | Not Available | Negative | 487761 - 488381 | 22224.4 |
| putative m18 family aminopeptidase 1 | BerOc1_00482 | Not Available | Negative | 488389 - 489771 | 50711.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
