Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | BerOc1_00463 | Not Available | Negative | 463037 - 465385 | 87141.3 |
| hypothetical protein | BerOc1_00464 | Not Available | Negative | 465396 - 465959 | 21257.6 |
| arabinose 5-phosphate isomerase kdsd | BerOc1_00465 | Not Available | Negative | 465959 - 466972 | 35020.3 |
| amidophosphoribosyltransferase precursor | BerOc1_00466 | Not Available | Negative | 467098 - 468510 | 52619.8 |
| carbamoyl-phosphate synthase large chain | BerOc1_00467 | Not Available | Negative | 468540 - 471773 | 119350.0 |
| feoa domain protein | BerOc1_00468 | Not Available | Positive | 472172 - 472453 | 9512.64 |
| hypothetical protein | BerOc1_00469 | Not Available | Positive | 472616 - 473566 | 35611.4 |
| hypothetical protein | BerOc1_00470 | Not Available | Negative | 473623 - 474405 | 29387.6 |
| methionine--trna ligase | BerOc1_00471 | Not Available | Negative | 474794 - 476731 | 73727.3 |
| hypothetical protein | BerOc1_00472 | Not Available | Negative | 476776 - 477924 | 43356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
