Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | BerOc1_00433 | Not Available | Positive | 433000 - 433290 | 10813.1 |
| 30s ribosomal protein s18 | BerOc1_00434 | Not Available | Positive | 433302 - 433565 | 10365.8 |
| 50s ribosomal protein l9 | BerOc1_00435 | Not Available | Positive | 433578 - 434129 | 19882.6 |
| replicative dna helicase | BerOc1_00436 | Not Available | Positive | 434098 - 435552 | 54020.1 |
| phenylacetate-coenzyme a ligase | BerOc1_00437 | Not Available | Positive | 435574 - 436863 | 48376.6 |
| hypothetical protein | BerOc1_00438 | Not Available | Positive | 436873 - 437370 | 17145.3 |
| carboxymuconolactone decarboxylase family protein | BerOc1_00439 | Not Available | Negative | 437415 - 437765 | 12709.6 |
| nte family protein rssa | BerOc1_00440 | Not Available | Negative | 437867 - 438748 | 31788.9 |
| threonine synthase | BerOc1_00441 | Not Available | Positive | 438914 - 440362 | 53220.7 |
| 16s/23s rrna (cytidine-2'-o)-methyltransferase tlya | BerOc1_00442 | Not Available | Positive | 440511 - 441260 | 27531.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
