Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Maturation protease for hydrogenase 2 | BerOc1_02992 | Not Available | Negative | 3286937 - 3287491 | 20009.0 |
| protein-export membrane protein secf | BerOc1_00001 | Not Available | Negative | 127 - 1191 | 37897.1 |
| protein translocase subunit secd | BerOc1_00002 | Not Available | Negative | 1202 - 2797 | 57540.7 |
| preprotein translocase subunit yajc | BerOc1_00003 | Not Available | Negative | 2927 - 3292 | 12676.6 |
| glutamate synthase | BerOc1_00004 | Not Available | Negative | 3336 - 4097 | 27495.2 |
| glutamate synthase | BerOc1_00005 | Not Available | Negative | 4098 - 5195 | 41601.0 |
| nitrite reductase | BerOc1_00006 | Not Available | Negative | 5207 - 6493 | 45751.8 |
| electron transport protein hydn | BerOc1_00007 | Not Available | Negative | 6503 - 6949 | 16224.6 |
| glutamate synthase | BerOc1_00008 | Not Available | Negative | 6962 - 8491 | 55208.0 |
| hypothetical protein | BerOc1_00009 | Not Available | Positive | 8998 - 9132 | 4572.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
