Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of rpos | BerOc1_03723 | Not Available | Positive | 4051792 - 4053306 | 55215.6 |
| bicarbonate transporter bica | BerOc1_03724 | Not Available | Positive | 4053489 - 4055144 | 57152.5 |
| putative n-acetyltransferase yjab | BerOc1_03725 | Not Available | Negative | 4055250 - 4055684 | 16387.7 |
| branched-chain amino acid transport protein (azld) | BerOc1_03726 | Not Available | Negative | 4055847 - 4056143 | 10318.2 |
| inner membrane protein ygaz | BerOc1_03727 | Not Available | Negative | 4056130 - 4056822 | 24461.1 |
| tetratricopeptide repeat protein | BerOc1_03728 | Not Available | Negative | 4056826 - 4058913 | 78335.3 |
| hypothetical protein | BerOc1_03729 | Not Available | Negative | 4059394 - 4059672 | 10559.8 |
| bifunctional folate synthesis protein | BerOc1_03730 | Not Available | Negative | 4059697 - 4060200 | 18794.1 |
| ll-diaminopimelate aminotransferase | BerOc1_03731 | Not Available | Negative | 4060197 - 4061363 | 42891.3 |
| tyrosine recombinase xerd | BerOc1_03732 | Not Available | Positive | 4061570 - 4062493 | 35255.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
