Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport system permease protein dppb | BerOc1_00332 | Not Available | Positive | 332183 - 333160 | 36254.6 |
| dipeptide transport system permease protein dppc | BerOc1_00333 | Not Available | Positive | 333162 - 334079 | 33660.0 |
| oligopeptide transport atp-binding protein oppd | BerOc1_00334 | Not Available | Positive | 334083 - 335054 | 35761.3 |
| oligopeptide transport atp-binding protein oppf | BerOc1_00335 | Not Available | Positive | 335057 - 336064 | 37071.9 |
| cai-1 autoinducer sensor kinase/phosphatase cqss | BerOc1_00336 | Not Available | Negative | 336264 - 336659 | 14816.0 |
| nadh peroxidase | BerOc1_00337 | Not Available | Negative | 336692 - 338401 | 61163.5 |
| 2-aminoadipate transaminase | BerOc1_00338 | Not Available | Negative | 338452 - 339630 | 43503.1 |
| bacterial extracellular solute-binding protein, family 3 | BerOc1_00339 | Not Available | Positive | 339988 - 340740 | 27970.9 |
| hypothetical protein | BerOc1_00340 | Not Available | Negative | 340839 - 341009 | 6785.43 |
| fumarate hydratase class i, anaerobic | BerOc1_00341 | Not Available | Negative | 341101 - 341652 | 19632.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
