Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux protein | BerOc1_03583 | Not Available | Negative | 3903526 - 3904917 | 50921.1 |
| chemotaxis protein chey | BerOc1_03584 | Not Available | Positive | 3905145 - 3905522 | 14147.4 |
| energy-coupling factor transporter atp-binding protein ecfa2 | BerOc1_03585 | Not Available | Negative | 3905530 - 3906246 | 25943.3 |
| nickel transport protein nikq | BerOc1_03586 | Not Available | Negative | 3906243 - 3907013 | 28564.9 |
| hd domain protein | BerOc1_03587 | Not Available | Negative | 3907109 - 3907672 | 20430.5 |
| oligopeptide transport atp-binding protein oppf | BerOc1_03588 | Not Available | Negative | 3907763 - 3908722 | 35226.9 |
| oligopeptide transport atp-binding protein oppd | BerOc1_03589 | Not Available | Negative | 3908726 - 3909694 | 35377.6 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase trmfo | BerOc1_03590 | Not Available | Positive | 3909772 - 3911100 | 48613.4 |
| methionine gamma-lyase | BerOc1_03591 | Not Available | Positive | 3911367 - 3912671 | 46397.8 |
| putative periplasmic serine endoprotease degp-like precursor | BerOc1_03592 | Not Available | Positive | 3912867 - 3915122 | 83483.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
