Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-1 | BerOc1_03513 | Not Available | Positive | 3834306 - 3834626 | 11501.9 |
| thioredoxin reductase | BerOc1_03514 | Not Available | Positive | 3834675 - 3835547 | 31837.4 |
| outer membrane protein assembly factor bamd precursor | BerOc1_03515 | Not Available | Positive | 3835556 - 3836284 | 28756.0 |
| hypothetical protein | BerOc1_03516 | Not Available | Positive | 3836319 - 3837182 | 30671.4 |
| elongation factor g | BerOc1_03517 | Not Available | Positive | 3837185 - 3839236 | 75098.3 |
| hypothetical protein | BerOc1_03518 | Not Available | Positive | 3839327 - 3839779 | 17156.4 |
| methyl-accepting chemotaxis protein mcps | BerOc1_03519 | Not Available | Positive | 3839924 - 3842005 | 74670.9 |
| chemotaxis protein chea | BerOc1_03520 | Not Available | Positive | 3842143 - 3844398 | 81527.9 |
| chemotaxis response regulator protein-glutamate methylesterase | BerOc1_03521 | Not Available | Positive | 3844417 - 3845484 | 38169.1 |
| hypothetical protein | BerOc1_03522 | Not Available | Negative | 3845600 - 3845932 | 12257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
