Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | BerOc1_03493 | Not Available | Positive | 3814744 - 3816123 | 48370.5 |
| Trna-leu | Not Available | Not Available | Positive | 3816196 - 3816280 | Not Available |
| trigger factor | BerOc1_03495 | Not Available | Positive | 3816332 - 3817834 | 55319.6 |
| atp-dependent clp protease proteolytic subunit | BerOc1_03496 | Not Available | Positive | 3818104 - 3818712 | 22161.9 |
| atp-dependent clp protease atp-binding subunit clpx | BerOc1_03497 | Not Available | Positive | 3818718 - 3819974 | 46209.0 |
| lon protease 1 | BerOc1_03498 | Not Available | Positive | 3820083 - 3822545 | 92293.7 |
| adp-ribosylglycohydrolase | BerOc1_03499 | Not Available | Positive | 3822636 - 3823619 | 35418.2 |
| hypothetical protein | BerOc1_03500 | Not Available | Negative | 3823616 - 3824155 | 20192.9 |
| murein dd-endopeptidase mepm | BerOc1_03501 | Not Available | Negative | 3824272 - 3825627 | 49018.6 |
| hypoxic response protein 1 | BerOc1_03502 | Not Available | Negative | 3825792 - 3826223 | 15845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
