Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yeea | BerOc1_03443 | Not Available | Positive | 3753930 - 3754973 | 39283.2 |
| class iii cytochrome c family protein | BerOc1_03444 | Not Available | Positive | 3755738 - 3756214 | 17572.4 |
| electron transport complex protein rnfc | BerOc1_03445 | Not Available | Positive | 3756218 - 3757363 | 41169.8 |
| na(+)-translocating nadh-quinone reductase subunit b | BerOc1_03446 | Not Available | Positive | 3757412 - 3758383 | 34565.0 |
| electron transport complex protein rnfg | BerOc1_03447 | Not Available | Positive | 3758386 - 3758955 | 19787.2 |
| electron transport complex protein rnfe | BerOc1_03448 | Not Available | Positive | 3758966 - 3759655 | 24187.4 |
| electron transport complex protein rnfa | BerOc1_03449 | Not Available | Positive | 3759658 - 3760233 | 20672.4 |
| glutamate synthase | BerOc1_03450 | Not Available | Positive | 3760259 - 3762373 | 75073.7 |
| inner membrane transport protein ynfm | BerOc1_03451 | Not Available | Negative | 3762527 - 3763747 | 41401.4 |
| hca operon transcriptional activator | BerOc1_03452 | Not Available | Positive | 3763880 - 3764773 | 33334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
