Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_03343 | Not Available | Positive | 3635949 - 3636935 | 37023.7 |
| ferric uptake regulation protein | BerOc1_03344 | Not Available | Negative | 3636937 - 3637368 | 16623.1 |
| Trna-ser | Not Available | Not Available | Positive | 3637567 - 3637658 | Not Available |
| signal transduction histidine-protein kinase bara | BerOc1_03346 | Not Available | Positive | 3638050 - 3642501 | 164094.0 |
| transcriptional regulatory protein zrar | BerOc1_03347 | Not Available | Negative | 3642533 - 3643891 | 49937.5 |
| sensor protein zras | BerOc1_03348 | Not Available | Negative | 3643905 - 3645704 | 64409.8 |
| zinc resistance protein | BerOc1_03349 | Not Available | Positive | 3645935 - 3646396 | 16088.5 |
| hypothetical protein | BerOc1_03350 | Not Available | Positive | 3646469 - 3646723 | 9717.85 |
| outer membrane efflux protein | BerOc1_03351 | Not Available | Positive | 3646876 - 3648240 | 50434.9 |
| hypothetical protein | BerOc1_03352 | Not Available | Positive | 3648244 - 3648519 | 10171.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
