Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar assembly factor fliw | BerOc1_03323 | Not Available | Positive | 3613804 - 3614223 | 15633.9 |
| anti-sigma-28 factor, flgm | BerOc1_03324 | Not Available | Negative | 3614248 - 3614556 | 11450.6 |
| hypothetical protein | BerOc1_03325 | Not Available | Negative | 3614585 - 3614995 | 15439.5 |
| putative inorganic polyphosphate/atp-nad kinase | BerOc1_03326 | Not Available | Positive | 3615160 - 3616023 | 30831.3 |
| hypothetical protein | BerOc1_03327 | Not Available | Positive | 3616026 - 3617789 | 68628.6 |
| membrane-bound lytic murein transglycosylase a precursor | BerOc1_03328 | Not Available | Positive | 3617813 - 3619255 | 53021.8 |
| hypothetical protein | BerOc1_03329 | Not Available | Positive | 3619248 - 3619892 | 24948.6 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | BerOc1_03330 | Not Available | Positive | 3619903 - 3621336 | 52903.9 |
| methylthioribose-1-phosphate isomerase | BerOc1_03331 | Not Available | Positive | 3621630 - 3622667 | 37766.4 |
| methyl-accepting chemotaxis protein pctc | BerOc1_03332 | Not Available | Positive | 3622819 - 3625140 | 83201.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
