Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | BerOc1_03303 | Not Available | Negative | 3595489 - 3595758 | 10368.7 |
| trna pseudouridine synthase b | BerOc1_03304 | Not Available | Negative | 3595823 - 3596764 | 34249.4 |
| bifunctional oligoribonuclease and pap phosphatase nrna | BerOc1_03305 | Not Available | Negative | 3596765 - 3597733 | 34904.5 |
| ribosome-binding factor a | BerOc1_03306 | Not Available | Negative | 3597708 - 3598049 | 12786.4 |
| hypothetical protein | BerOc1_03307 | Not Available | Negative | 3598061 - 3598354 | 10704.0 |
| translation initiation factor if-2 | BerOc1_03308 | Not Available | Negative | 3598426 - 3601317 | 103869.0 |
| hypothetical protein | BerOc1_03309 | Not Available | Negative | 3601322 - 3601558 | 8796.87 |
| hypothetical protein | BerOc1_03310 | Not Available | Negative | 3601579 - 3602952 | 50908.1 |
| ribosome maturation factor rimp | BerOc1_03311 | Not Available | Negative | 3603007 - 3603465 | 16962.5 |
| Trna-gly | Not Available | Not Available | Positive | 3603582 - 3603657 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
