Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | BerOc1_03293 | Not Available | Negative | 3583570 - 3583941 | 13368.5 |
| nitrogen regulatory protein p-ii | BerOc1_03294 | Not Available | Negative | 3583951 - 3584274 | 11396.9 |
| nitrogenase iron protein 1 | BerOc1_03295 | Not Available | Negative | 3584342 - 3585169 | 29973.0 |
| pyridoxamine 5'-phosphate oxidase | BerOc1_03296 | Not Available | Negative | 3585518 - 3585997 | 17416.8 |
| gmp synthase | BerOc1_03297 | Not Available | Negative | 3585998 - 3586693 | 25054.9 |
| transcriptional regulatory protein zrar | BerOc1_03298 | Not Available | Positive | 3587126 - 3588142 | 37955.4 |
| outer membrane protein assembly factor bamd | BerOc1_03299 | Not Available | Positive | 3588333 - 3591617 | 119971.0 |
| hypothetical protein | BerOc1_03300 | Not Available | Positive | 3591749 - 3592558 | 28569.3 |
| glutaredoxin | BerOc1_03301 | Not Available | Negative | 3592655 - 3592858 | 7383.01 |
| polyribonucleotide nucleotidyltransferase | BerOc1_03302 | Not Available | Negative | 3592985 - 3595234 | 81857.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
