Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BerOc1_00291 | Not Available | Positive | 287284 - 288009 | 26063.7 |
| lipid a export atp-binding/permease protein msba | BerOc1_00292 | Not Available | Positive | 288223 - 290031 | 66362.5 |
| hypothetical protein | BerOc1_00293 | Not Available | Positive | 290220 - 290819 | 23151.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | BerOc1_00294 | Not Available | Negative | 291070 - 293397 | 84877.4 |
| glutamate synthase | BerOc1_00295 | Not Available | Negative | 293428 - 295062 | 59262.0 |
| glutamine amidotransferases class-ii | BerOc1_00296 | Not Available | Negative | 295026 - 296117 | 40459.6 |
| hypothetical protein | BerOc1_00297 | Not Available | Negative | 296611 - 297012 | 14781.4 |
| membrane-bound lytic murein transglycosylase a precursor | BerOc1_00298 | Not Available | Negative | 297050 - 298309 | 45509.5 |
| putative inner membrane protein | BerOc1_00299 | Not Available | Negative | 298306 - 299415 | 41065.7 |
| autoinducer 2 sensor kinase/phosphatase luxq | BerOc1_00300 | Not Available | Negative | 299456 - 301021 | 56433.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
