Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio hydrargyri |
| Strain | BerOc1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737881 bp
Thymine Count
739754 bp
Guanine Count
1301445 bp
Cytosine Count
1302029 bp
Genome Length
4081579 bp
Protein-coding Genes
3668 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | BerOc1_03283 | Not Available | Positive | 3572811 - 3573512 | 26144.2 |
| putative nickel-responsive regulator | BerOc1_03284 | Not Available | Positive | 3573527 - 3573946 | 15735.8 |
| gtp cyclohydrolase fole2 | BerOc1_03285 | Not Available | Positive | 3574138 - 3574908 | 28917.4 |
| flagellar basal-body rod protein flgc | BerOc1_03286 | Not Available | Positive | 3574998 - 3575324 | 11091.9 |
| ferredoxin--nadp reductase | BerOc1_03287 | Not Available | Positive | 3575637 - 3577031 | 50572.7 |
| nitrogen fixation protein vnfa | BerOc1_03288 | Not Available | Positive | 3577649 - 3579331 | 62455.4 |
| hypothetical protein | BerOc1_03289 | Not Available | Negative | 3579449 - 3580096 | 23189.3 |
| nitrogenase iron-iron protein beta chain | BerOc1_03290 | Not Available | Negative | 3580209 - 3581597 | 51061.7 |
| nitrogenase iron-iron protein delta chain | BerOc1_03291 | Not Available | Negative | 3581610 - 3581960 | 13667.5 |
| nitrogenase iron-iron protein alpha chain | BerOc1_03292 | Not Available | Negative | 3581970 - 3583535 | 59003.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
